基因数据分析软件迁移-cicros

安装系统依赖

yum install expat-devel perl-CPAN gd gd-devel.aarch64 -y

安装perl模块

cpan App::cpanminus

cpanm --mirror https://mirrors.163.com/cpan Math::Round

cpanm --mirror https://mirrors.163.com/cpan Digest::MD5

cpanm --mirror https://mirrors.163.com/cpan List::MoreUtils

cpanm --mirror https://mirrors.163.com/cpan Clone

cpanm --mirror https://mirrors.163.com/cpan Font::TTF::Font

cpanm --mirror https://mirrors.163.com/cpan -f Font::TTF::Font

cpanm --mirror https://mirrors.163.com/cpan Config::General

cpanm --mirror https://mirrors.163.com/cpan Params::Validate

cpanm --mirror https://mirrors.163.com/cpan SVG

cpanm --mirror https://mirrors.163.com/cpan Readonly

cpanm --mirror https://mirrors.163.com/cpan GD::Polyline

cpanm --mirror https://mirrors.163.com/cpan Math::Bezier

cpanm --mirror https://mirrors.163.com/cpan GD

cpanm --mirror https://mirrors.163.com/cpan Math::VecStat

cpanm --mirror https://mirrors.163.com/cpan Set::IntSpan

cpanm --mirror https://mirrors.163.com/cpan Text::Format

cpanm --mirror https://mirrors.163.com/cpan Regexp::Common

cpanm --mirror https://mirrors.163.com/cpan Statistics::Basic

下载circos软件包

wget http://circos.ca/distribution/circos-0.69-9.tgz

解压软件包

tar –xf circos-0.69-9.tgz

验证

bin/circos --help

备注，如果出现如下错误，表示对应perl模块未安装

missing Math::Round error Can't locate Math/Round.pm in @INC (@INC contains: /pkg/dst/circos-0.69-9/bin/lib /pkg/dst/circos-0.69-9/bin/../lib /pkg/dst/circos-0.69-9/bin /root/perl5/lib/perl5/5.16.3 /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 34) line 1.

基因测序

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